STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP_1792Glycosyl transferase, group 2 family protein. (809 aa)    
Predicted Functional Partners:
PP_1793
Glycosyl transferase, group 2 family protein.
 
     0.945
PP_1794
Conserved hypothetical protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; 16517623, 6233695, 11688802, 11222281, 7585354.
 
   0.779
PP_1778
Lipopolysaccharide ABC export system, permease protein.
 
  
 0.732
PP_3135
Putative Glycosyl transferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
   
 0.718
PP_3142
Putative Sugar transferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
  
 0.713
PP_1795
Homologs of previously reported genes of unknown function.
  
   0.696
PP_1790
Putative Acylneuraminate cytidylyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
  
 0.670
PP_1789
Hydrolase, haloacid dehalogenase-like family.
  
    0.664
PP_1779
Lipopolysaccharide ABC export system, ATP-binding protein.
 
  
 0.661
PP_1791
Putative Aldolase/synthase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
    0.659
Your Current Organism:
Pseudomonas putida KT2440
NCBI taxonomy Id: 160488
Other names: P. putida KT2440, Pseudomonas putida (strain KT2440), Pseudomonas putida str. KT2440
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.