STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
etpPutative phosphotyrosine-protein phosphatase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Proteinfate : Protein modification and repair; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. (154 aa)    
Predicted Functional Partners:
kdsB
3-deoxy-manno-octulosonate cytidylyltransferase; Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria.
    
 0.963
PP_1901
Conserved protein of unknown function, UPF0434 family; Homologs of previously reported genes of unknown function; Unknown function; Belongs to the UPF0434 family.
       0.807
murB
UDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation.
       0.807
PP_1899
ExbD/TolR family protein.
  
  
 0.692
PP_1898
MotA/TolQ/ExbB proton channel family protein.
       0.684
lpxK
Tetraacyldisaccharide 4'-kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA).
       0.684
PP_1897
DNA internalization-related competence protein ComEC/Rec2.
       0.573
phr
Deoxyribodipyrimidine photolyase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Biosynthesisofcofactors,prostheticgroups,andcarriers : Riboflavin, FMN, and FAD; Belongs to the DNA photolyase family.
 
  
   0.569
PP_3126
Putative polysaccharide exported protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
  
 0.537
PP_5481
Homologs of previously reported genes of unknown function; Unknown function.
 
     0.534
Your Current Organism:
Pseudomonas putida KT2440
NCBI taxonomy Id: 160488
Other names: P. putida KT2440, Pseudomonas putida (strain KT2440), Pseudomonas putida str. KT2440
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.