STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
PP_2064Multidrug efflux RND membrane fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (365 aa)    
Predicted Functional Partners:
PP_2065
Multidrug efflux RND transporter; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.972
PP_0906
Putative Multidrug efflux RND transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.962
PP_4923
Outer membrane efflux protein.
 
 0.944
PP_2558
Putative Outer membrane efflux protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
 0.931
PP_1798
Outer membrane efflux protein.
  
 0.927
PP_2069
Putative Multidrug efflux MFS outer membrane protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
 
 0.890
mexD
Multidrug efflux RND transporter MexD.
 
 
 0.866
mexF
Multidrug efflux RND transporter MexF.
 
 
 0.861
PP_1264
Putative Fusaric acid resistance protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
      
 0.856
PP_5174
Efflux membrane fusion protein, RND family; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  
  0.822
Your Current Organism:
Pseudomonas putida KT2440
NCBI taxonomy Id: 160488
Other names: P. putida KT2440, Pseudomonas putida (strain KT2440), Pseudomonas putida str. KT2440
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