STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP_2100Two-component sensor protein; Function of homologous gene experimentally demonstrated in an other organism; receptor. (1211 aa)    
Predicted Functional Partners:
PP_3413
Sensor histidine kinase/response regulator.
 
0.996
evgA
DNA-binding response regulator in two-component regulatory system with EvgS; Function of homologous gene experimentally demonstrated in an other organism; regulator.
 0.995
PP_3761
Sensor histidine kinase/response regulator.
 
 
0.980
bvgA
Putative Virulence factors positive transcription regulator BvgA; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
 0.979
gacS
Sensor protein GacS.
 
 
0.972
PP_1695
Putative Sodium-solute symporter/sensory box histidine kinase/response regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
 
0.972
PP_3728
Sensor histidine kinase/response regulator.
 
 
0.972
PP_2128
Putative CheV-like chemotaxis protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
  
 
 0.965
PP_2354
Sensory box histidine kinase/response regulator.
 
 
0.965
PP_4824
Sensor histidine kinase/response regulator.
 
 
0.962
Your Current Organism:
Pseudomonas putida KT2440
NCBI taxonomy Id: 160488
Other names: P. putida KT2440, Pseudomonas putida (strain KT2440), Pseudomonas putida str. KT2440
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