STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP_2153Homologs of previously reported genes of unknown function; Unknown function. (159 aa)    
Predicted Functional Partners:
ugpQ
Glycerophosphoryl diester phosphodiesterase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
    0.725
fliS
Flagellar chaperone, inhibits premature FliC assembly; Function experimentally demonstrated in the studied genus; factor; Cellenvelope : Surface structures.
  
  
 0.636
fliD
Flagellar filament capping protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.
  
    0.588
PP_4335
Flagellar motor protein; Function of strongly homologous gene; cell process.
  
 
 0.574
lolD
Lipoprotein-releasing system ATP-binding protein LolD; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner.
       0.572
flgK
Flagellar hook-associated protein FlgK; Belongs to the flagella basal body rod proteins family.
  
  
 0.558
motB
Flagellar motor rotation protein; Function of homologous gene experimentally demonstrated in an other organism; cell process; Transport and binding proteins.
  
 
 0.537
PP_4396
Homologs of previously reported genes of unknown function.
  
  
 0.533
lolC
LolC.
       0.527
fliM
Flagellar synthesis, switching and energizing component; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
  
 
 0.517
Your Current Organism:
Pseudomonas putida KT2440
NCBI taxonomy Id: 160488
Other names: P. putida KT2440, Pseudomonas putida (strain KT2440), Pseudomonas putida str. KT2440
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