Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
PP_2153Homologs of previously reported genes of unknown function; Unknown function. (159 aa)    
Predicted Functional Partners:
ugpQ
Glycerophosphoryl diester phosphodiesterase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
       0.820
lolD
Lipoprotein-releasing system ATP-binding protein LolD; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner.
       0.730
fliS
Flagellar chaperone, inhibits premature FliC assembly; Function experimentally demonstrated in the studied genus; factor; Cellenvelope : Surface structures.
  
  
 0.683
fliD
Flagellar filament capping protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.
  
  
 0.628
lolC
LolC.
  
    0.597
PP_4335
Flagellar motor protein; Function of strongly homologous gene; cell process.
  
 
 0.595
flgK
Flagellar hook-associated protein FlgK; Belongs to the flagella basal body rod proteins family.
  
  
 0.570
PP_4396
Homologs of previously reported genes of unknown function.
  
  
 0.568
PP_4336
Flagellar motor rotation protein; Function of strongly homologous gene; cell process.
  
 
 0.542
motA
Flagellar motor rotation protein; Function of homologous gene experimentally demonstrated in an other organism; cell process; Transport and binding proteins.
  
 
 0.542
Your Current Organism:
Pseudomonas putida KT2440
NCBI taxonomy Id: 160488
Other names: P. putida KT2440, Pseudomonas putida (strain KT2440), Pseudomonas putida str. KT2440
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