Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PP_0563 | PP_2165 | PP_0563 | PP_2165 | Response regulator. | Response regulator. | 0.718 |
PP_0563 | PP_3413 | PP_0563 | PP_3413 | Response regulator. | Sensor histidine kinase/response regulator. | 0.942 |
PP_0563 | PP_3728 | PP_0563 | PP_3728 | Response regulator. | Sensor histidine kinase/response regulator. | 0.935 |
PP_0563 | PP_4362 | PP_0563 | PP_4362 | Response regulator. | Homologs of previously reported genes of unknown function. | 0.506 |
PP_0563 | PP_4364 | PP_0563 | PP_4364 | Response regulator. | Putative Anti-sigma F factor antagonist; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | 0.486 |
PP_0563 | gacS | PP_0563 | PP_1650 | Response regulator. | Sensor protein GacS. | 0.949 |
PP_1350 | PP_2165 | PP_1350 | PP_2165 | Sensory box histidine kinase/response regulator. | Response regulator. | 0.760 |
PP_1350 | PP_3413 | PP_1350 | PP_3413 | Sensory box histidine kinase/response regulator. | Sensor histidine kinase/response regulator. | 0.697 |
PP_1350 | PP_3728 | PP_1350 | PP_3728 | Sensory box histidine kinase/response regulator. | Sensor histidine kinase/response regulator. | 0.492 |
PP_1350 | PP_4362 | PP_1350 | PP_4362 | Sensory box histidine kinase/response regulator. | Homologs of previously reported genes of unknown function. | 0.422 |
PP_1350 | flgJ | PP_1350 | PP_4382 | Sensory box histidine kinase/response regulator. | Peptidoglycan hydrolase FlgJ. | 0.475 |
PP_1350 | gacS | PP_1350 | PP_1650 | Sensory box histidine kinase/response regulator. | Sensor protein GacS. | 0.800 |
PP_2165 | PP_0563 | PP_2165 | PP_0563 | Response regulator. | Response regulator. | 0.718 |
PP_2165 | PP_1350 | PP_2165 | PP_1350 | Response regulator. | Sensory box histidine kinase/response regulator. | 0.760 |
PP_2165 | PP_2166 | PP_2165 | PP_2166 | Response regulator. | Anti-anti-sigma factor. | 0.989 |
PP_2165 | PP_3024 | PP_2165 | PP_3024 | Response regulator. | Homologs of previously reported genes of unknown function. | 0.805 |
PP_2165 | PP_3413 | PP_2165 | PP_3413 | Response regulator. | Sensor histidine kinase/response regulator. | 0.850 |
PP_2165 | PP_3728 | PP_2165 | PP_3728 | Response regulator. | Sensor histidine kinase/response regulator. | 0.846 |
PP_2165 | PP_4362 | PP_2165 | PP_4362 | Response regulator. | Homologs of previously reported genes of unknown function. | 0.755 |
PP_2165 | PP_4364 | PP_2165 | PP_4364 | Response regulator. | Putative Anti-sigma F factor antagonist; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | 0.846 |
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