Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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experimentally determined
co-expression
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gene co-occurrence
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[Homology]
Score
PP_2185Putative Formate dehydrogenase, alpha subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (960 aa)    
Predicted Functional Partners:
PP_2183
Putative Formate dehydrogenase, gamma subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
 0.999
PP_2186
Putative Formate dehydrogenase, delta subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
 0.999
PP_2184
Putative Formate dehydrogenase, beta subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 0.998
fdoH
Formate dehydrogenase-O, beta subunit; The beta chain is an electron transfer unit containing 4 cysteine clusters involved in the formation of iron-sulfur centers.
  
 
 0.979
fdoI
Formate dehydrogenase-O, gamma subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Energymetabolism : Aerobic.
  
 
 0.978
PP_5371
Rubredoxin/rubredoxin reductase; Belongs to the FAD-dependent oxidoreductase family.
 
  
 0.949
fdoG
Formate dehydrogenase-O major subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Energymetabolism : Aerobic.
 
 
0.919
gltD
Glutamate synthase (NADPH) beta subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Aminoacidbiosynthesis : Glutamate family.
    
 0.913
pydX
NADP-dependent dihydropyrimidine dehydrogenase subunit; Function of strongly homologous gene; enzyme; Fattyacidandphospholipidmetabolism : Degradation.
    
 0.912
frmC
S-formylglutathione hydrolase / S-lactoylglutathione hydrolase; Serine hydrolase involved in the detoxification of formaldehyde.
    
  0.909
Your Current Organism:
Pseudomonas putida KT2440
NCBI taxonomy Id: 160488
Other names: P. putida KT2440, Pseudomonas putida (strain KT2440), Pseudomonas putida str. KT2440
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