STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fepAFerric enterobactin transport system outer membrane subunit; Function of homologous gene experimentally demonstrated in an other organism; transporter; Transportandbindingproteins : Cations and iron carrying compounds. (744 aa)    
Predicted Functional Partners:
tonB
Protein TonB.
  
 
 0.845
PP_0532
Homologs of previously reported genes of unknown function.
 
  
 0.825
tolA
Colicin S4 and filamentous phage transport system; Function experimentally demonstrated in the studied strain; transporter; Cellenvelope : Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides.
  
 
 0.741
yjbB
Na+/Pi-cotransporter; Function of homologous gene experimentally demonstrated in an other organism; transporter; Transport and binding proteins.
  
  
 0.695
PP_0669
Outer membrane ferric siderophore receptor.
  
  
 0.684
PP_0160
Putative ferrioxamine receptor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative receptor.
  
  
 0.674
PP_0272
Outer membrane ferric siderophore receptor.
  
  
 0.671
bfr-I
Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family.
      
 0.647
PP_4856
Ferritin, Dps family protein.
      
 0.647
PP_4755
Outer membrane ferrichrome-iron receptor.
  
  
 0.635
Your Current Organism:
Pseudomonas putida KT2440
NCBI taxonomy Id: 160488
Other names: P. putida KT2440, Pseudomonas putida (strain KT2440), Pseudomonas putida str. KT2440
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