STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP_2258Sensory box protein. (562 aa)    
Predicted Functional Partners:
PP_2106
Putative Ammonium transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
    
 0.878
PP_3758
Response regulator/sensor histidine kinase.
 
 
 0.865
PP_2257
Putative aerotaxis receptor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative receptor.
 
 
0.857
PP_1154
Sensory box protein.
 
 
0.814
PP_1695
Putative Sodium-solute symporter/sensory box histidine kinase/response regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
 
 0.807
PP_2945
Putative sensor histidine kinase/response regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
 
 
 0.797
PP_3711
Diguanylate cyclase; Function of strongly homologous gene; enzyme.
 
 
0.781
PP_3728
Sensor histidine kinase/response regulator.
 
 0.779
yegE
Diguanylate cyclase with phosphodiesterase domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Proteinfate : Protein modification and repair.
 
 
0.773
PP_3761
Sensor histidine kinase/response regulator.
 
 
 0.773
Your Current Organism:
Pseudomonas putida KT2440
NCBI taxonomy Id: 160488
Other names: P. putida KT2440, Pseudomonas putida (strain KT2440), Pseudomonas putida str. KT2440
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.