STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
PP_2260Putative glycerol-phosphate ABC transporter, ATP-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter; Belongs to the ABC transporter superfamily. (364 aa)    
Predicted Functional Partners:
PP_2262
Sugar ABC transporter, permease protein; Function of strongly homologous gene; transporter; Transport and binding proteins.
 
 0.999
PP_2263
Sugar ABC transporter, permease protein.
 
 0.999
PP_2264
Putative Sugar ABC transporter, periplasmic sugar-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
 0.995
PP_2261
Sugar ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
0.986
PP_5505
Homologs of previously reported genes of unknown function; Unknown function.
 
    0.946
PP_2259
Putative sigma-54 dependent transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
 
  
 0.886
ptxB
Phosphonate transport system-binding protein; Function experimentally demonstrated in the studied genus; transporter; Centralintermediarymetabolism : Phosphorus compounds.
   
 
 0.834
gtsB
Mannose/glucose ABC transporter, permease protein; Function experimentally demonstrated in the studied strain; transporter; Transport and binding proteins.
 
 
 0.834
gtsC
Mannose/glucose ABC transporter, permease protein; Function experimentally demonstrated in the studied strain; transporter; Transport and binding proteins.
 
 
 0.801
ptxC
Putative phosphonate transport system permease protein PtxC; Function experimentally demonstrated in the studied genus; putative transporter; Centralintermediarymetabolism : Phosphorus compounds.
      
 0.785
Your Current Organism:
Pseudomonas putida KT2440
NCBI taxonomy Id: 160488
Other names: P. putida KT2440, Pseudomonas putida (strain KT2440), Pseudomonas putida str. KT2440
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