oprI protein (Pseudomonas putida KT2440) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

oprI

Major outer membrane lipoprotein. (83 aa)

Predicted Functional Partners:

oprL

0.869

PP_2323

0.810

oprF

0.761

oprH

0.745

oprG

0.702

oprQ

0.650

PP_1692

0.646

PP_1728

0.635

PP_2741

0.635

PP_5256

0.635

Your Current Organism:

Pseudomonas putida KT2440

NCBI taxonomy Id: 160488
Other names: P. putida KT2440, Pseudomonas putida (strain KT2440), Pseudomonas putida str. KT2440

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PP_1692	PP_2323	PP_1692	PP_2323	Homologs of previously reported genes of unknown function; Unknown function.	Homologs of previously reported genes of unknown function.	0.838
PP_1692	oprI	PP_1692	PP_2322	Homologs of previously reported genes of unknown function; Unknown function.	Major outer membrane lipoprotein.	0.646
PP_1692	oprQ	PP_1692	PP_0268	Homologs of previously reported genes of unknown function; Unknown function.	Outer-membrane porin D; Function experimentally demonstrated in the studied genus; transporter; Transportandbindingproteins : Porins.	0.518
PP_1728	PP_5256	PP_1728	PP_5256	Homologs of previously reported genes of unknown function.	Cyclic nucleotide-binding protein.	0.870
PP_1728	oprG	PP_1728	PP_0504	Homologs of previously reported genes of unknown function.	Outer membrane protein OprG.	0.486
PP_1728	oprH	PP_1728	PP_1185	Homologs of previously reported genes of unknown function.	Outer membrane protein H1.	0.450
PP_1728	oprI	PP_1728	PP_2322	Homologs of previously reported genes of unknown function.	Major outer membrane lipoprotein.	0.635
PP_2323	PP_1692	PP_2323	PP_1692	Homologs of previously reported genes of unknown function.	Homologs of previously reported genes of unknown function; Unknown function.	0.838
PP_2323	oprI	PP_2323	PP_2322	Homologs of previously reported genes of unknown function.	Major outer membrane lipoprotein.	0.810
PP_2323	oprQ	PP_2323	PP_0268	Homologs of previously reported genes of unknown function.	Outer-membrane porin D; Function experimentally demonstrated in the studied genus; transporter; Transportandbindingproteins : Porins.	0.646
PP_2741	PP_5256	PP_2741	PP_5256	Homologs of previously reported genes of unknown function.	Cyclic nucleotide-binding protein.	0.468
PP_2741	oprG	PP_2741	PP_0504	Homologs of previously reported genes of unknown function.	Outer membrane protein OprG.	0.483
PP_2741	oprH	PP_2741	PP_1185	Homologs of previously reported genes of unknown function.	Outer membrane protein H1.	0.450
PP_2741	oprI	PP_2741	PP_2322	Homologs of previously reported genes of unknown function.	Major outer membrane lipoprotein.	0.635
PP_5256	PP_1728	PP_5256	PP_1728	Cyclic nucleotide-binding protein.	Homologs of previously reported genes of unknown function.	0.870
PP_5256	PP_2741	PP_5256	PP_2741	Cyclic nucleotide-binding protein.	Homologs of previously reported genes of unknown function.	0.468
PP_5256	oprG	PP_5256	PP_0504	Cyclic nucleotide-binding protein.	Outer membrane protein OprG.	0.571
PP_5256	oprH	PP_5256	PP_1185	Cyclic nucleotide-binding protein.	Outer membrane protein H1.	0.488
PP_5256	oprI	PP_5256	PP_2322	Cyclic nucleotide-binding protein.	Major outer membrane lipoprotein.	0.635
oprF	oprG	PP_2089	PP_0504	Outer membrane porin F.	Outer membrane protein OprG.	0.899