STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP_2347DNA-binding response regulator. (222 aa)    
Predicted Functional Partners:
PP_2348
Sensor histidine kinase.
 
 
 0.962
PP_2346
Homologs of previously reported genes of unknown function.
 
  
 0.904
PP_1437
Heavy metal sensor histidine kinase; Member of a two-component regulatory system.
 
 0.822
czrSA
Metal-sensor histidine kinase; Member of a two-component regulatory system.
 
 0.818
PP_4505
Sensor histidine kinase.
 
 0.814
PP_2714
Sensor histidine kinase.
 
 0.813
PP_2683
Putative sensory box histidine kinase/response regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
 
 0.805
pfeS-I
Histidine kinase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
 
 0.803
pfeS-II
Histidine kinase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
 0.802
PP_2906
Sensor histidine kinase.
 
 0.802
Your Current Organism:
Pseudomonas putida KT2440
NCBI taxonomy Id: 160488
Other names: P. putida KT2440, Pseudomonas putida (strain KT2440), Pseudomonas putida str. KT2440
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.