Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PP_2379Putative cytochrome oxidase biogenesis protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor; Energymetabolism : Electron transport. (202 aa)    
Predicted Functional Partners:
PP_2380
Homologs of previously reported genes of unknown function.
 
   
 0.936
PP_0103
Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
 
 0.758
PP_4836
Homologs of previously reported genes of unknown function.
 
   
 0.758
PP_0109
Homologs of previously reported genes of unknown function.
 
 0.751
PP_0105
Cytochrome C oxidase assembly protein.
 
 0.748
cyoE1
CyoE like protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.
  
 0.714
PP_1646
Putative Thioredoxin; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
 
 0.665
PP_4236
Putative Thiol:disulfide interchange protein dsbE; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
 
 0.648
PP_0107
Homologs of previously reported genes of unknown function; Unknown function.
 
 
 0.632
cyoA
Cytochrome bo terminal oxidase subunit II; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Energymetabolism : Aerobic.
  
 0.597
Your Current Organism:
Pseudomonas putida KT2440
NCBI taxonomy Id: 160488
Other names: P. putida KT2440, Pseudomonas putida (strain KT2440), Pseudomonas putida str. KT2440
Server load: low (12%) [HD]