STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP_2398Conserved protein of unknown function, UPF0276 family; Homologs of previously reported genes of unknown function; Unknown function; Belongs to the UPF0276 family. (277 aa)    
Predicted Functional Partners:
PP_2399
Homologs of previously reported genes of unknown function.
 
  
 0.983
PP_0993
Homologs of previously reported genes of unknown function.
 
  
 0.947
PP_0991
Homologs of previously reported genes of unknown function.
  
 0.946
PP_2397
EF hand domain protein.
 
  
 0.892
PP_0990
DoxX family protein.
  
 0.838
PP_2400
Homologs of previously reported genes of unknown function.
 
  
 0.690
PP_2396
Homologs of previously reported genes of unknown function.
       0.555
PP_4924
Serine protease, subtilase family.
   
    0.534
PP_2422
Conserved protein of unknown function; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
   
  
 0.531
PP_3335
Homologs of previously reported genes of unknown function.
   
 
 0.515
Your Current Organism:
Pseudomonas putida KT2440
NCBI taxonomy Id: 160488
Other names: P. putida KT2440, Pseudomonas putida (strain KT2440), Pseudomonas putida str. KT2440
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.