STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP_2422Conserved protein of unknown function; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family. (117 aa)    
Predicted Functional Partners:
PP_2421
Acetyltransferase, GNAT family.
       0.560
lpxOA
Fe(2+)/alpha-ketoglutarate-dependent dioxygenase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Cell envelope.
       0.517
PP_0235
Peroxidase.
  
  
 0.492
PP_4924
Serine protease, subtilase family.
   
    0.479
PP_0992
Conserved protein of unknown function, UPF0276 family; Homologs of previously reported genes of unknown function; Unknown function; Belongs to the UPF0276 family.
   
  
 0.448
PP_2398
Conserved protein of unknown function, UPF0276 family; Homologs of previously reported genes of unknown function; Unknown function; Belongs to the UPF0276 family.
   
  
 0.448
PP_0993
Homologs of previously reported genes of unknown function.
   
    0.437
mgtA
Magnesium transporter, ATP-dependent; Function of homologous gene experimentally demonstrated in an other organism; transporter; Energymetabolism : ATP-proton motive force interconversion.
 
  
 0.402
Your Current Organism:
Pseudomonas putida KT2440
NCBI taxonomy Id: 160488
Other names: P. putida KT2440, Pseudomonas putida (strain KT2440), Pseudomonas putida str. KT2440
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.