STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP_2489Putative Xenobiotic reductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (366 aa)    
Predicted Functional Partners:
ecd
Flavoprotein; Belongs to the flavin oxidoreductase frp family.
  
  
 0.782
PP_3657
P-nitrobenzoate reductase NfnB.
  
  
 0.752
PP_3959
Voltage-gated chloride channel family protein.
     
 0.679
PP_3209
Isoxanthopterin deaminase.
   
  
 0.676
PP_0241
Transporter.
   
  
 0.675
oguA
Hydroxydechloroatrazine ethylaminohydrolase; Function of strongly homologous gene; enzyme; Biologicalprocesses : Scavenge (Catabolism).
      
 0.675
sprT
Conserved protein of unknown function, SprT family; Homologs of previously reported genes of unknown function; Unknown function; Belongs to the SprT family.
   
  
 0.648
azoR1
FMN-dependent NADH-azoreductase 1; Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity; Belongs to the azoreductase type 1 family.
   
  
 0.648
gshA
Glutamate--cysteine ligase; Belongs to the glutamate--cysteine ligase type 1 family. Type 1 subfamily.
   
  
 0.515
hutF
Probable formiminoglutamate deiminase; Function experimentally demonstrated in the studied strain; putative enzyme; Fattyacidandphospholipidmetabolism : Degradation.
      
 0.483
Your Current Organism:
Pseudomonas putida KT2440
NCBI taxonomy Id: 160488
Other names: P. putida KT2440, Pseudomonas putida (strain KT2440), Pseudomonas putida str. KT2440
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