STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
PP_2548Putative Sugar MFS transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (438 aa)    
Predicted Functional Partners:
PP_2549
Homologs of previously reported genes of unknown function.
  
    0.739
PP_2040
Major facilitator family transporter.
  
    0.706
murA
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
      
 0.584
cyaA
Adenylate cyclase; Function experimentally demonstrated in the studied strain; enzyme.
      
 0.584
PP_1072
Leucine-rich repeat domain protein.
  
     0.530
PP_2394
Leucine-rich repeat domain protein.
  
     0.523
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
  
  
 0.516
glpF
Aquaglyceroporin; Function of homologous gene experimentally demonstrated in an other organism; transporter; Fattyacidandphospholipidmetabolism : Biosynthesis; Belongs to the MIP/aquaporin (TC 1.A.8) family.
 
  
 0.515
PP_2550
Putative transcriptional regulatory protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator; Regulatory functions.
       0.506
PP_4758
Major facilitator family transporter.
  
     0.491
Your Current Organism:
Pseudomonas putida KT2440
NCBI taxonomy Id: 160488
Other names: P. putida KT2440, Pseudomonas putida (strain KT2440), Pseudomonas putida str. KT2440
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