Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
yijPPutative phosphoethanolamine transferase CptA; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (584 aa)    
Predicted Functional Partners:
PP_5152
Homologs of previously reported genes of unknown function.
  
   
 0.896
PP_0033
Putative undecaprenyl-glycosyl transferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
  
 0.886
PP_1779
Lipopolysaccharide ABC export system, ATP-binding protein.
      
 0.870
rarA
DNA-dependent ATPase required for recombination; Function experimentally demonstrated in the studied strain; cell process; DNAmetabolism : DNA replication, recombination, and repair.
      
 0.861
PP_0165
GGDEF domain protein.
      
 0.851
PP_0034
Putative bactoprenol glycosyl-transferase from phage origin; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
  
 0.830
PP_0903
Homologs of previously reported genes of unknown function.
 
   
 0.830
dusB
tRNA-dihydrouridine synthase B; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the Dus family. DusB subfamily.
   
  
 0.821
PP_0905
Homologs of previously reported genes of unknown function.
      
 0.820
PP_0035
Putative bactoprenol-linked glycose transferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
  
 0.788
Your Current Organism:
Pseudomonas putida KT2440
NCBI taxonomy Id: 160488
Other names: P. putida KT2440, Pseudomonas putida (strain KT2440), Pseudomonas putida str. KT2440
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