STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
oguAHydroxydechloroatrazine ethylaminohydrolase; Function of strongly homologous gene; enzyme; Biologicalprocesses : Scavenge (Catabolism). (457 aa)    
Predicted Functional Partners:
PP_3959
Voltage-gated chloride channel family protein.
     
 0.838
PP_0241
Transporter.
      
 0.835
PP_2489
Putative Xenobiotic reductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
      
 0.675
pucM
5-hydroxyisourate hydrolase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Fattyacidandphospholipidmetabolism : Degradation; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.
 
  
 0.655
xenB
Xenobiotic reductase B.
      
 0.648
PP_1478
Putative Xenobiotic reductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
      
 0.646
qmcA
Putative membrane protease family, stomatin; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Proteinfate : Degradation of proteins, peptides, and glycopeptides.
      0.560
codA
Cytosine deaminase / isoguanine deaminase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Purines,pyrimidines,nucleosides,andnucleotides : Nucleotide and nucleoside interconversions.
    
 0.560
xanP
Xanthine permease; Function of homologous gene experimentally demonstrated in an other organism; transporter; Transport and binding proteins.
    0.553
uacT
Uric acid permease; Function of homologous gene experimentally demonstrated in an other organism; transporter; Transport and binding proteins.
    0.539
Your Current Organism:
Pseudomonas putida KT2440
NCBI taxonomy Id: 160488
Other names: P. putida KT2440, Pseudomonas putida (strain KT2440), Pseudomonas putida str. KT2440
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