STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fatDFerric anguibactin transport system permease protein FatD; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (313 aa)    
Predicted Functional Partners:
PP_2593
Ferric siderophore ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
  
 0.997
fatB
Ferric anguibactin-binding protein.
 
  
 0.993
PP_2592
Ferric siderophore ABC transporter, ATP-binding protein.
 
  
 0.992
PP_2595
Putative ABC transporter, permease/ATP-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter; Transport and binding proteins.
 
     0.880
PP_2596
Putative ABC transporter, permease/ATP-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
    0.859
PP_2590
Outer membrane ferric siderophore receptor.
 
     0.756
hmuV
Hemin import ATP-binding protein HmuV; Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system.
  
     0.746
PP_2416
Putative Iron ABC transporter, ATP-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
  
 0.737
PP_2597
Homologs of previously reported genes of unknown function; Unknown function.
 
     0.737
PP_4689
Heme/hemin ABC transporter, periplasmic heme/hemin-binding protein.
  
     0.677
Your Current Organism:
Pseudomonas putida KT2440
NCBI taxonomy Id: 160488
Other names: P. putida KT2440, Pseudomonas putida (strain KT2440), Pseudomonas putida str. KT2440
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