STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bcsGPutative endoglucanase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Cellenvelope : Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides. (537 aa)    
Predicted Functional Partners:
bcsA
Cellulose synthase and translocator subunit; Catalytic subunit of cellulose synthase. It polymerizes uridine 5'-diphosphate glucose to cellulose.
  
 
 0.998
bcsB
Cellulose synthase and translocator subunit; Binds the cellulose synthase activator, bis-(3'-5') cyclic diguanylic acid (c-di-GMP); Belongs to the AcsB/BcsB family.
   
 
 0.987
bcsZ
endo-1,4-D-glucanase subunit of cellulose synthase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Energymetabolism : Biosynthesis and degradation of polysaccharides; Belongs to the glycosyl hydrolase 8 (cellulase D) family.
     
 0.967
PP_2634
Putative Cellulose synthase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
       0.869
PP_4642
Cyclic diguanosine monophosphate-binding protein; Binds the second messenger bis-(3'-5') cyclic dimeric guanosine monophosphate (c-di-GMP). Can bind two c-di-GMP molecules per monomer. May play a role in bacterial second-messenger regulated processes. Binding to c-di-GMP induces a conformational change of the C- and N-termini resulting in the exposure of a highly negative surface on one side of the protein to a possible effector protein.
      
 0.825
PP_2638
Putative Cellulose synthase operon C protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
       0.816
PP_2631
Putative cellulose biosynthesis, BcsF/YhjT; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme; Unknownfunction : Enzymes of unknown specificity.
  
    0.782
PP_2633
Homologs of previously reported genes of unknown function.
       0.773
PP_0129
GGDEF domain protein.
      
 0.654
PP_3140
Glycosyl transferase, group 2 family protein.
  
 
 0.555
Your Current Organism:
Pseudomonas putida KT2440
NCBI taxonomy Id: 160488
Other names: P. putida KT2440, Pseudomonas putida (strain KT2440), Pseudomonas putida str. KT2440
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