STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP_2694Aldehyde dehydrogenase family protein. (480 aa)    
Predicted Functional Partners:
PP_2693
Putative Dipeptidase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
    0.862
PP_2691
Homologs of previously reported genes of unknown function.
 
    0.849
ttuD
Putative hydroxypyruvate reductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
   
  
 0.739
PP_2695
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
 
    0.693
fmt
Methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
 
    
 0.608
dhaT
1,3-propanediol dehydrogenase.
 
 
 0.599
PP_2692
Putative Transporter, BCCT family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the BCCT transporter (TC 2.A.15) family.
  
  
 0.594
PP_2690
Homologs of previously reported genes of unknown function.
  
    0.592
PP_2689
Putative Endoribonuclease; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
   0.561
gcl
Glyoxylate carboligase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Energy metabolism; Belongs to the TPP enzyme family.
 
    
 0.519
Your Current Organism:
Pseudomonas putida KT2440
NCBI taxonomy Id: 160488
Other names: P. putida KT2440, Pseudomonas putida (strain KT2440), Pseudomonas putida str. KT2440
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.