PP_2728 protein (Pseudomonas putida KT2440) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

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Cooccurrence

Coexpression

Experiments

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[Homology]

Score

PP_2728

Homologs of previously reported genes of unknown function. (163 aa)

Predicted Functional Partners:

PP_2727

0.562

PP_2730

0.531

PP_2732

0.524

PP_2731

0.521

PP_2729

0.518

PP_5469

0.453

PP_3404

0.442

PP_2726

0.400

Your Current Organism:

Pseudomonas putida KT2440

NCBI taxonomy Id: 160488
Other names: P. putida KT2440, Pseudomonas putida (strain KT2440), Pseudomonas putida str. KT2440

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
PP_2726	PP_2727	Homologs of previously reported genes of unknown function.	Putative C-factor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.	0.536
PP_2726	PP_2728	Homologs of previously reported genes of unknown function.	Homologs of previously reported genes of unknown function.	0.400
PP_2727	PP_2726	Putative C-factor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.	Homologs of previously reported genes of unknown function.	0.536
PP_2727	PP_2728	Putative C-factor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.	Homologs of previously reported genes of unknown function.	0.562
PP_2727	PP_2729	Putative C-factor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.	Homologs of previously reported genes of unknown function.	0.483
PP_2727	PP_2730	Putative C-factor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.	Putative Lipoprotein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.	0.689
PP_2727	PP_2731	Putative C-factor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.	Homologs of previously reported genes of unknown function.	0.605
PP_2727	PP_2732	Putative C-factor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.	Homologs of previously reported genes of unknown function.	0.740
PP_2728	PP_2726	Homologs of previously reported genes of unknown function.	Homologs of previously reported genes of unknown function.	0.400
PP_2728	PP_2727	Homologs of previously reported genes of unknown function.	Putative C-factor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.	0.562
PP_2728	PP_2729	Homologs of previously reported genes of unknown function.	Homologs of previously reported genes of unknown function.	0.518
PP_2728	PP_2730	Homologs of previously reported genes of unknown function.	Putative Lipoprotein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.	0.531
PP_2728	PP_2731	Homologs of previously reported genes of unknown function.	Homologs of previously reported genes of unknown function.	0.521
PP_2728	PP_2732	Homologs of previously reported genes of unknown function.	Homologs of previously reported genes of unknown function.	0.524
PP_2728	PP_3404	Homologs of previously reported genes of unknown function.	Homologs of previously reported genes of unknown function.	0.442
PP_2728	PP_5469	Homologs of previously reported genes of unknown function.	Putative SAM-dependent methyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	0.453
PP_2729	PP_2727	Homologs of previously reported genes of unknown function.	Putative C-factor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.	0.483
PP_2729	PP_2728	Homologs of previously reported genes of unknown function.	Homologs of previously reported genes of unknown function.	0.518
PP_2729	PP_2730	Homologs of previously reported genes of unknown function.	Putative Lipoprotein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.	0.953
PP_2729	PP_2731	Homologs of previously reported genes of unknown function.	Homologs of previously reported genes of unknown function.	0.868