Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
PP_2737Oxidoreductase, short-chain dehydrogenase/reductase family. (250 aa)    
Predicted Functional Partners:
PP_2738
Putative Transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
  
 0.994
PP_2736
Homologs of previously reported genes of unknown function.
 
   
 0.993
PP_2735
Homologs of previously reported genes of unknown function.
 
  
 0.989
PP_2733
Homologs of previously reported genes of unknown function.
 
  
 0.967
PP_2739
Putative Sensory box protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
     
 0.884
PP_2740
Transcriptional regulator, MerR family.
 
   
 0.882
PP_2730
Putative Lipoprotein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
    0.880
cfa
Cyclopropane-fatty-acyl-phospholipid synthase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Fatty acid and phospholipid metabolism.
 
  
 0.875
PP_2732
Homologs of previously reported genes of unknown function.
 
  
 0.851
PP_3208
Oxidoreductase, Pdr/VanB family.
     
 0.747
Your Current Organism:
Pseudomonas putida KT2440
NCBI taxonomy Id: 160488
Other names: P. putida KT2440, Pseudomonas putida (strain KT2440), Pseudomonas putida str. KT2440
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