Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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gene co-occurrence
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[Homology]
Score
PP_2761Putative Ribose ABC transporter, permease protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the binding-protein-dependent transport system permease family. (328 aa)    
Predicted Functional Partners:
PP_2757
Putative Sugar-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
 0.999
PP_2758
Putative Ribose ABC transporter, periplasmic ribose-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
 0.997
rbsA-II
Ribose ABC transporter - ATP-binding subunit; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 0.996
rbsB
Ribose ABC transporter, periplasmic ribose-binding subunit; Function of homologous gene experimentally demonstrated in an other organism; transporter.
 0.990
PP_2760
Putative ribose transport permease protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter; Belongs to the binding-protein-dependent transport system permease family.
 
  
 
0.985
rbsA-I
Ribose ABC transporter - ATP-binding subunit; Function of homologous gene experimentally demonstrated in an other organism; transporter.
 0.982
rbsD
Ribose pyranase; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose.
 
  
 0.948
rbsC
D-ribose ABC transporter - permease subunit; Function of homologous gene experimentally demonstrated in an other organism; transporter; Energy metabolism; Belongs to the binding-protein-dependent transport system permease family.
  
  
 
0.927
rbsK
Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
 
  
 0.838
PP_2756
Homologs of previously reported genes of unknown function.
       0.773
Your Current Organism:
Pseudomonas putida KT2440
NCBI taxonomy Id: 160488
Other names: P. putida KT2440, Pseudomonas putida (strain KT2440), Pseudomonas putida str. KT2440
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