STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP_2761Putative Ribose ABC transporter, permease protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the binding-protein-dependent transport system permease family. (328 aa)    
Predicted Functional Partners:
PP_2757
Putative Sugar-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
 0.999
PP_2758
Putative Ribose ABC transporter, periplasmic ribose-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
 0.997
rbsA-II
Ribose ABC transporter - ATP-binding subunit; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 0.996
rbsB
Ribose ABC transporter, periplasmic ribose-binding subunit; Function of homologous gene experimentally demonstrated in an other organism; transporter.
 0.990
PP_2760
Putative ribose transport permease protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter; Belongs to the binding-protein-dependent transport system permease family.
 
  
 
0.984
rbsA-I
Ribose ABC transporter - ATP-binding subunit; Function of homologous gene experimentally demonstrated in an other organism; transporter.
 0.983
rbsD
Ribose pyranase; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose.
 
  
 0.935
rbsC
D-ribose ABC transporter - permease subunit; Function of homologous gene experimentally demonstrated in an other organism; transporter; Energy metabolism; Belongs to the binding-protein-dependent transport system permease family.
  
  
 
0.927
rbsK
Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
 
  
 0.837
PP_2372
Putative Periplasmic sugar-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
 
 0.781
Your Current Organism:
Pseudomonas putida KT2440
NCBI taxonomy Id: 160488
Other names: P. putida KT2440, Pseudomonas putida (strain KT2440), Pseudomonas putida str. KT2440
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