Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
sfnAacyl-CoA dehydrogenase/oxidase family protein; Function experimentally demonstrated in the studied genus; enzyme; Cellular processes. (412 aa)    
Predicted Functional Partners:
PP_2765
Putative Sulfonate monooxygenase MsuD; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
    0.905
dmoA-I
Dimethyl-sulfide monooxygenase; Function of strongly homologous gene; enzyme; Central intermediary metabolism.
    0.829
dmoA-II
Dimethyl-sulfide monooxygenase; Function of strongly homologous gene; enzyme; Central intermediary metabolism.
    0.816
PP_0222
Monooxygenase, DszA family.
    0.814
msuE
FMN reductase (NADPH); Function of homologous gene experimentally demonstrated in an other organism; enzyme; Centralintermediarymetabolism : Sulfur metabolism.
 
    0.790
PP_2039
Putative Acyl-CoA dehydrogenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
   
 0.787
PP_3492
Short-chain acyl-CoA dehydrogenase; Function of strongly homologous gene; enzyme.
  
   
 0.782
PP_3725
Putative Acyl-CoA dehydrogenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
  
 0.779
PP_3218
Monooxygenase, NtaA/SnaA/SoxA family.
    0.772
PP_3638
Putative Acyl-CoA dehydrogenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
      
 0.741
Your Current Organism:
Pseudomonas putida KT2440
NCBI taxonomy Id: 160488
Other names: P. putida KT2440, Pseudomonas putida (strain KT2440), Pseudomonas putida str. KT2440
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