STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
actP-IIAcetate permease; Function of homologous gene experimentally demonstrated in an other organism; transporter; Transportandbindingproteins : Carbohydrates, organic alcohols, and acids; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (552 aa)    
Predicted Functional Partners:
PP_2796
Homologs of previously reported genes of unknown function.
  
 0.980
yjcH
Conserved inner membrane protein of unknown function; Homologs of previously reported genes of unknown function; putative membrane component; Unknown function.
 
  
 0.975
PP_0354
CBS domain protein.
 
  
 0.932
PP_3273
Homologs of previously reported genes of unknown function.
 
  
 0.900
PP_2794
Oxidoreductase, short chain dehydrogenase/reductase family.
  
  
 0.852
PP_2791
Aminoglycoside phosphotransferase.
  
  
 0.828
PP_2795
AMP-binding domain protein.
  
  
 0.744
acs
Butyrate--CoA ligase; Function experimentally demonstrated in the studied genus; enzyme; Fatty acid and phospholipid metabolism.
   
  
 0.717
scpC
propionyl-CoA:succinate CoA transferase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Central intermediary metabolism.
   
  
 0.695
PP_2793
Acyl-CoA dehydrogenase family protein.
  
  
 0.684
Your Current Organism:
Pseudomonas putida KT2440
NCBI taxonomy Id: 160488
Other names: P. putida KT2440, Pseudomonas putida (strain KT2440), Pseudomonas putida str. KT2440
Server load: medium (56%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.