STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
dhaT1,3-propanediol dehydrogenase. (394 aa)    
Predicted Functional Partners:
calB
Coniferyl aldehyde dehydrogenase; Function experimentally demonstrated in the studied species; enzyme; Fattyacidandphospholipidmetabolism : Degradation; Belongs to the aldehyde dehydrogenase family.
 
 
 0.902
aldA
Putative aldehyde dehydrogenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the aldehyde dehydrogenase family.
  
 
 0.888
PP_5372
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.888
aldB-II
Aldehyde dehydrogenase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the aldehyde dehydrogenase family.
  
 
 0.887
aldB-I
Aldehyde dehydrogenase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Energy metabolism; Belongs to the aldehyde dehydrogenase family.
  
 
 0.886
PP_2802
Amino acid permease family protein.
 
 
 0.827
prr
Gamma-aminobutyraldehyde dehydrogenase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the aldehyde dehydrogenase family.
  
 
 0.642
PP_5350
Transcriptional regulator, RpiR family.
     
 0.639
PP_2694
Aldehyde dehydrogenase family protein.
  
 
 0.613
adhP
Short-chain alcohol dehydrogenase; Function experimentally demonstrated in the studied genus; enzyme; Energymetabolism : Anaerobic.
 
 
 0.598
Your Current Organism:
Pseudomonas putida KT2440
NCBI taxonomy Id: 160488
Other names: P. putida KT2440, Pseudomonas putida (strain KT2440), Pseudomonas putida str. KT2440
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