Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
PP_2869Oxidoreductase, FMN-binding. (650 aa)    
Predicted Functional Partners:
gltB
L-glutamate synthase(NADPH) alpha subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Aminoacidbiosynthesis : Glutamate family.
  
 
 0.999
PP_0313
Putative electron transfer flavoprotein beta subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
 
 0.888
etfB
Electron transfer flavoprotein subunit beta.
  
 
 0.858
PP_2641
Iron-sulfur cluster-binding protein.
  
 0.850
PP_0899
Putative Ferredoxin reductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
 0.826
benC
Benzoate 1,2-dioxygenase electron transfer component; Function experimentally demonstrated in the studied species; enzyme; Energy metabolism.
  
 0.826
PP_5212
Oxidoreductase, iron-sulfur-binding.
  
 0.826
pydA
NADP-dependent dihydropyrimidine dehydrogenase subunit PreA; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Central intermediary metabolism.
  
 
 0.798
PP_0312
Electron transfer flavoprotein, alpha subunit; Function of strongly homologous gene; carrier; Energy metabolism.
 
 
 0.770
etfA
Electron transfer flavoprotein subunit alpha.
  
 
 0.740
Your Current Organism:
Pseudomonas putida KT2440
NCBI taxonomy Id: 160488
Other names: P. putida KT2440, Pseudomonas putida (strain KT2440), Pseudomonas putida str. KT2440
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