STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP_2882Putative 2-hydroxychromene-2-carboxylate isomerase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (204 aa)    
Predicted Functional Partners:
PP_2881
Oxidoreductase, short chain dehydrogenase/reductase family.
 
    0.871
PP_2880
Transcriptional regulator, TetR family.
 
     0.599
PP_3205
Fumarylacetoacetate hydrolase family protein.
      
 0.513
PP_2879
Homologs of previously reported genes of unknown function.
  
    0.511
paaE
Ring 1,2-phenylacetyl-CoA epoxidase, reductase subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Energy metabolism.
   
  
 0.445
PP_0335
Glutathione S-transferase family protein.
  
    0.437
PP_1709
Fumarylacetoacetate hydrolase family protein.
      
 0.434
aroQ-III
3-dehydroquinate dehydratase 3, type II; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family.
      
 0.432
PP_4983
Putative amine oxidase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Unknownfunction : Enzymes of unknown specificity.
  
   
 0.403
Your Current Organism:
Pseudomonas putida KT2440
NCBI taxonomy Id: 160488
Other names: P. putida KT2440, Pseudomonas putida (strain KT2440), Pseudomonas putida str. KT2440
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