Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
PP_2887Catalase-related peroxidase; Has an organic peroxide-dependent peroxidase activity. Belongs to the catalase family. (350 aa)    
Predicted Functional Partners:
PP_2886
Putative Cytochrome b561; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
    0.957
katE
Hydroperoxidase - self catalytic heme d synthase; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
  
0.942
katA
Catalase; Belongs to the catalase family.
  
  
0.932
katG
Catalase-peroxidase; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily.
    
 0.928
PP_2889
Putative Transmembrane regulator PrtR; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
    0.782
PP_3639
Alkylhydroperoxidase AhpD domain protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
      
 0.724
paaZ
oxepin-CoA hydrolase/3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Energy metabolism.
   
 0.679
PP_3248
Dyp-type peroxidase family protein.
 
  
 0.645
PP_2885
Putative Transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
    0.604
ohr
Organic hydroperoxide resistance protein.
  
  
 0.583
Your Current Organism:
Pseudomonas putida KT2440
NCBI taxonomy Id: 160488
Other names: P. putida KT2440, Pseudomonas putida (strain KT2440), Pseudomonas putida str. KT2440
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