gpW protein (Pseudomonas putida KT2440) - STRING interaction network

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

gpW

Pyocin R2_PP, baseplate protein. (108 aa)

Predicted Functional Partners:

gpV

0.998

gpD

0.998

gpI

0.996

gpJ

0.995

PP_3059

0.992

PP_3060

0.985

gpU

0.985

PP_3046

0.962

PP_3056

0.950

PP_3064

0.931

Your Current Organism:

Pseudomonas putida KT2440

NCBI taxonomy Id: 160488
Other names: P. putida KT2440, Pseudomonas putida (strain KT2440), Pseudomonas putida str. KT2440

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PP_3046	PP_3056	PP_3046	PP_3056	Homologs of previously reported genes of unknown function.	Putative Pyocin R2_PP, tail fiber protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.	0.866
PP_3046	PP_3059	PP_3046	PP_3059	Homologs of previously reported genes of unknown function.	Putative tail sheath protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin.	0.434
PP_3046	PP_3060	PP_3046	PP_3060	Homologs of previously reported genes of unknown function.	Putative tail sheath protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin.	0.921
PP_3046	PP_3064	PP_3046	PP_3064	Homologs of previously reported genes of unknown function.	Phage tail protein.	0.869
PP_3046	gpD	PP_3046	PP_3065	Homologs of previously reported genes of unknown function.	Pyocin R2_PP, tail formation.	0.912
PP_3046	gpI	PP_3046	PP_3055	Homologs of previously reported genes of unknown function.	Pyocin R2_PP, tail formation protein.	0.928
PP_3046	gpJ	PP_3046	PP_3054	Homologs of previously reported genes of unknown function.	Pyocin R2_PP, baseplate/tail fiber protein.	0.924
PP_3046	gpU	PP_3046	PP_3063	Homologs of previously reported genes of unknown function.	Pyocin R2_PP, tail formation protein.	0.878
PP_3046	gpV	PP_3046	PP_3051	Homologs of previously reported genes of unknown function.	Pyocin R2_PP, tail spike protein.	0.929
PP_3046	gpW	PP_3046	PP_3053	Homologs of previously reported genes of unknown function.	Pyocin R2_PP, baseplate protein.	0.962
PP_3056	PP_3046	PP_3056	PP_3046	Putative Pyocin R2_PP, tail fiber protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.	Homologs of previously reported genes of unknown function.	0.866
PP_3056	PP_3059	PP_3056	PP_3059	Putative Pyocin R2_PP, tail fiber protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.	Putative tail sheath protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin.	0.877
PP_3056	PP_3060	PP_3056	PP_3060	Putative Pyocin R2_PP, tail fiber protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.	Putative tail sheath protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin.	0.878
PP_3056	PP_3064	PP_3056	PP_3064	Putative Pyocin R2_PP, tail fiber protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.	Phage tail protein.	0.847
PP_3056	gpD	PP_3056	PP_3065	Putative Pyocin R2_PP, tail fiber protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.	Pyocin R2_PP, tail formation.	0.853
PP_3056	gpI	PP_3056	PP_3055	Putative Pyocin R2_PP, tail fiber protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.	Pyocin R2_PP, tail formation protein.	0.960
PP_3056	gpJ	PP_3056	PP_3054	Putative Pyocin R2_PP, tail fiber protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.	Pyocin R2_PP, baseplate/tail fiber protein.	0.959
PP_3056	gpU	PP_3056	PP_3063	Putative Pyocin R2_PP, tail fiber protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.	Pyocin R2_PP, tail formation protein.	0.875
PP_3056	gpV	PP_3056	PP_3051	Putative Pyocin R2_PP, tail fiber protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.	Pyocin R2_PP, tail spike protein.	0.931
PP_3056	gpW	PP_3056	PP_3053	Putative Pyocin R2_PP, tail fiber protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.	Pyocin R2_PP, baseplate protein.	0.950