gpU protein (Pseudomonas putida KT2440) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

gpU

Pyocin R2_PP, tail formation protein. (281 aa)

Predicted Functional Partners:

gpJ

0.989

gpI

0.989

PP_3059

0.989

PP_3064

0.989

gpD

0.988

gpW

0.985

PP_3060

0.985

gpV

0.971

PP_3062

0.945

aguA

0.930

Your Current Organism:

Pseudomonas putida KT2440

NCBI taxonomy Id: 160488
Other names: P. putida KT2440, Pseudomonas putida (strain KT2440), Pseudomonas putida str. KT2440

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PP_3059	PP_3060	PP_3059	PP_3060	Putative tail sheath protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin.	Putative tail sheath protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin.	0.998
PP_3059	PP_3062	PP_3059	PP_3062	Putative tail sheath protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin.	Putative Pyocin R2_PP, tail length determination protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.	0.863
PP_3059	PP_3064	PP_3059	PP_3064	Putative tail sheath protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin.	Phage tail protein.	0.950
PP_3059	gpD	PP_3059	PP_3065	Putative tail sheath protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin.	Pyocin R2_PP, tail formation.	0.989
PP_3059	gpI	PP_3059	PP_3055	Putative tail sheath protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin.	Pyocin R2_PP, tail formation protein.	0.990
PP_3059	gpJ	PP_3059	PP_3054	Putative tail sheath protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin.	Pyocin R2_PP, baseplate/tail fiber protein.	0.988
PP_3059	gpU	PP_3059	PP_3063	Putative tail sheath protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin.	Pyocin R2_PP, tail formation protein.	0.989
PP_3059	gpV	PP_3059	PP_3051	Putative tail sheath protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin.	Pyocin R2_PP, tail spike protein.	0.981
PP_3059	gpW	PP_3059	PP_3053	Putative tail sheath protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin.	Pyocin R2_PP, baseplate protein.	0.992
PP_3060	PP_3059	PP_3060	PP_3059	Putative tail sheath protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin.	Putative tail sheath protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin.	0.998
PP_3060	PP_3062	PP_3060	PP_3062	Putative tail sheath protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin.	Putative Pyocin R2_PP, tail length determination protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.	0.860
PP_3060	PP_3064	PP_3060	PP_3064	Putative tail sheath protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin.	Phage tail protein.	0.934
PP_3060	gpD	PP_3060	PP_3065	Putative tail sheath protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin.	Pyocin R2_PP, tail formation.	0.974
PP_3060	gpI	PP_3060	PP_3055	Putative tail sheath protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin.	Pyocin R2_PP, tail formation protein.	0.987
PP_3060	gpJ	PP_3060	PP_3054	Putative tail sheath protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin.	Pyocin R2_PP, baseplate/tail fiber protein.	0.988
PP_3060	gpU	PP_3060	PP_3063	Putative tail sheath protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin.	Pyocin R2_PP, tail formation protein.	0.985
PP_3060	gpV	PP_3060	PP_3051	Putative tail sheath protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin.	Pyocin R2_PP, tail spike protein.	0.978
PP_3060	gpW	PP_3060	PP_3053	Putative tail sheath protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin.	Pyocin R2_PP, baseplate protein.	0.985
PP_3062	PP_3059	PP_3062	PP_3059	Putative Pyocin R2_PP, tail length determination protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.	Putative tail sheath protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin.	0.863
PP_3062	PP_3060	PP_3062	PP_3060	Putative Pyocin R2_PP, tail length determination protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.	Putative tail sheath protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin.	0.860