Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
PP_3127Putative Exopolysaccharide transport protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (512 aa)    
Predicted Functional Partners:
PP_3128
Putative Exopolysaccharide biosynthesis/transport protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
 
 0.996
PP_3126
Putative polysaccharide exported protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
 
 0.995
PP_3142
Putative Sugar transferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
  
 0.910
PP_5587
Homologs of previously reported genes of unknown function; Unknown function.
       0.817
PP_3132
Putative Polysaccharide transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
  
 0.797
PP_3137
Glycosyl transferase, group 2 family protein.
 
  
 0.676
PP_3139
Glycosyl transferase, group 1 family protein.
 
  
 0.626
algA
Mannose-6-phosphate isomerase/mannose-1-phosphate guanylyltransferase; Produces a precursor for alginate polymerization. The alginate layer provides a protective barrier against host immune defenses and antibiotics (By similarity).
  
  
 0.583
PP_1776
Mannose-6-phosphate isomerase/mannose-1-phosphate guanylyltransferase; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
  
 0.583
PP_2124
Putative Glycosyl transferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
  
 0.576
Your Current Organism:
Pseudomonas putida KT2440
NCBI taxonomy Id: 160488
Other names: P. putida KT2440, Pseudomonas putida (strain KT2440), Pseudomonas putida str. KT2440
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