Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
PP_3209Isoxanthopterin deaminase. (476 aa)    
Predicted Functional Partners:
PP_0241
Transporter.
      
 0.861
hutF
Probable formiminoglutamate deiminase; Function experimentally demonstrated in the studied strain; putative enzyme; Fattyacidandphospholipidmetabolism : Degradation.
  
   
 0.858
PP_3959
Voltage-gated chloride channel family protein.
     
 0.853
PP_3208
Oxidoreductase, Pdr/VanB family.
 
     0.802
PP_3210
ABC transporter, permease protein.
 
    0.746
PP_2489
Putative Xenobiotic reductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
      
 0.740
PP_3211
ABC transporter, ATP-binding protein.
 
     0.739
PP_3212
Rieske 2Fe-2S family protein.
 
     0.712
PP_1478
Putative Xenobiotic reductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
      
 0.701
xenB
Xenobiotic reductase B.
   
  
 0.658
Your Current Organism:
Pseudomonas putida KT2440
NCBI taxonomy Id: 160488
Other names: P. putida KT2440, Pseudomonas putida (strain KT2440), Pseudomonas putida str. KT2440
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