STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP_3234Heat shock protein, HSP20 family; Belongs to the small heat shock protein (HSP20) family. (231 aa)    
Predicted Functional Partners:
PP_3230
Phosphoribosyl transferase domain protein.
 
  
 0.811
PP_3313
Putative Heat shock protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the small heat shock protein (HSP20) family.
  
    0.770
PP_3237
Universal stress protein family.
  
 
 0.703
PP_3316
Putative Chaperone-associated ATPase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the ClpA/ClpB family.
 
 
 0.673
PP_3238
Putative Transcriptional regulator PyrR; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
     
 0.653
PP_3232
Acetyltransferase, GNAT family.
     
 0.652
PP_3289
Acetyltransferase, GNAT family.
     
 0.647
PP_3292
Homologs of previously reported genes of unknown function.
      
 0.642
PP_3290
Universal stress protein family.
   
 
 0.636
PP_3235
Homologs of previously reported genes of unknown function.
  
    0.628
Your Current Organism:
Pseudomonas putida KT2440
NCBI taxonomy Id: 160488
Other names: P. putida KT2440, Pseudomonas putida (strain KT2440), Pseudomonas putida str. KT2440
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.