STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mgtCMagnesium transporter, MgtC family. (237 aa)    
Predicted Functional Partners:
mgtA
Magnesium transporter, ATP-dependent; Function of homologous gene experimentally demonstrated in an other organism; transporter; Energymetabolism : ATP-proton motive force interconversion.
 
 
 0.916
PP_0947
Homologs of previously reported genes of unknown function.
  
  
 0.840
PP_1836
Putative metal transporter, ZIP family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter; Transport and binding proteins.
  
  
 0.840
PP_4261
Cation-transporting P-type ATPase; Function of strongly homologous gene; transporter; Energymetabolism : Aerobic.
  
  
 0.839
cadA-III
Cadmium translocating P-type ATPase; Function experimentally demonstrated in the studied genus; transporter; Biologicalprocesses : Circulate.
  
  
 0.839
kdpF
Potassium-transporting ATPase F; Function of homologous gene experimentally demonstrated in an other organism; transporter; Transportandbindingproteins : Cations and iron carrying compounds.
      
 0.836
PP_5140
Transcriptional regulator, MerR family.
      
 0.835
PP_2646
Homologs of previously reported genes of unknown function.
   
  
 0.746
PP_3243
Acetyltransferase, GNAT family.
       0.739
nfuA
Fe/S biogenesis protein NfuA; Involved in iron-sulfur cluster biogenesis. Binds a 4Fe-4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe/S proteins. Could also act as a scaffold/chaperone for damaged Fe/S proteins.
  
  
 0.654
Your Current Organism:
Pseudomonas putida KT2440
NCBI taxonomy Id: 160488
Other names: P. putida KT2440, Pseudomonas putida (strain KT2440), Pseudomonas putida str. KT2440
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.