STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
PP_3248Dyp-type peroxidase family protein. (287 aa)    
Predicted Functional Partners:
PP_5154
Putative Oxidoreductase, FAD-binding; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
      
 0.767
copA-II
Copper resistance protein A; Function experimentally demonstrated in the studied genus; transporter; Biologicalprocesses : Circulate.
      
 0.730
PP_2887
Catalase-related peroxidase; Has an organic peroxide-dependent peroxidase activity. Belongs to the catalase family.
 
  
 0.645
PP_1832
Putative Oxidase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
      
 0.634
PP_3639
Alkylhydroperoxidase AhpD domain protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
      
 0.634
PP_0180
Putative cytochrome c family protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
  
  
 0.621
PP_2380
Homologs of previously reported genes of unknown function.
  
  
 0.589
PP_4836
Homologs of previously reported genes of unknown function.
  
  
 0.589
PP_3249
Putative oxidoreductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Unknownfunction : Enzymes of unknown specificity.
  
  
 0.567
katG
Catalase-peroxidase; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily.
      
 0.566
Your Current Organism:
Pseudomonas putida KT2440
NCBI taxonomy Id: 160488
Other names: P. putida KT2440, Pseudomonas putida (strain KT2440), Pseudomonas putida str. KT2440
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.