STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
paaKphenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). (439 aa)    
Predicted Functional Partners:
paaA
Ring 1,2-phenylacetyl-CoA epoxidase alpha subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Energy metabolism.
 
 
 0.997
paaD
Putative subunit of phenylacetate degradation enzyme; Function experimentally demonstrated in the studied species; putative regulator; Energy metabolism.
 
 
 0.996
paaB
Ring 1,2-phenylacetyl-CoA epoxidase regulatory subunit; Function of homologous gene experimentally demonstrated in an other organism; putative enzyme; Energy metabolism.
 
 
 0.996
paaI
hydroxyphenylacetyl-CoA thioesterase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Biologicalprocesses : Scavenge (Catabolism).
 
 
 0.996
paaC
Ring 1,2-phenylacetyl-CoA epoxidase beta subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Energy metabolism.
 
 
 0.995
paaE
Ring 1,2-phenylacetyl-CoA epoxidase, reductase subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Energy metabolism.
 
 
 0.990
paaG
1,2-epoxyphenylacetyl-CoA isomerase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Energy metabolism.
 
  
 0.972
paaZ
oxepin-CoA hydrolase/3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Energy metabolism.
 
 
 
 0.961
paaH
3-hydroxyadipyl-CoA dehydrogenase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Energy metabolism.
  
  
 0.934
peaE
Phenylacetaldehyde dehydrogenase; Function experimentally demonstrated in the studied species; enzyme; Energymetabolism : Amino acids and amines; Belongs to the aldehyde dehydrogenase family.
  
 0.926
Your Current Organism:
Pseudomonas putida KT2440
NCBI taxonomy Id: 160488
Other names: P. putida KT2440, Pseudomonas putida (strain KT2440), Pseudomonas putida str. KT2440
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