STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP_3314Heat shock protein, HSP20 family; Belongs to the small heat shock protein (HSP20) family. (151 aa)    
Predicted Functional Partners:
PP_3312
Putative Heat shock protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the small heat shock protein (HSP20) family.
 
  
 0.983
PP_3313
Putative Heat shock protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the small heat shock protein (HSP20) family.
 
  
0.840
PP_3316
Putative Chaperone-associated ATPase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the ClpA/ClpB family.
 
 
 0.822
ibpA
Small heat shock protein IbpA; Function of homologous gene experimentally demonstrated in an other organism; factor; Cellularprocesses : Adaptations to atypical conditions; Belongs to the small heat shock protein (HSP20) family.
  
  
 0.684
clpB
Chaperone protein ClpB; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE. Acts before DnaK, in the processing of protein aggregates. Protein binding stimulates the ATPase activity; ATP hydrolysis unfolds the denatured protein aggregates, which probably helps expose new hydrophobic binding sites on the surface of ClpB-bound aggregates, contributing to the solubilization and refolding of denatured protein aggregates by DnaK (By similarity). Belongs to the ClpA/ClpB family.
 
 
 0.639
clpV
Protein ClpV1; Belongs to the ClpA/ClpB family.
 
 
 0.627
clpA
ATP-dependent serine protease; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Proteinfate : Degradation of proteins, peptides, and glycopeptides; Belongs to the ClpA/ClpB family.
 
 
 0.614
prpC
Methylcitrate synthase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Energy metabolism; Belongs to the citrate synthase family.
   
  
 0.597
gltA
Citrate synthase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Energymetabolism : Anaerobic; Belongs to the citrate synthase family.
  
  
 0.529
PP_3315
Homologs of previously reported genes of unknown function.
  
    0.487
Your Current Organism:
Pseudomonas putida KT2440
NCBI taxonomy Id: 160488
Other names: P. putida KT2440, Pseudomonas putida (strain KT2440), Pseudomonas putida str. KT2440
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.