STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP_3315Homologs of previously reported genes of unknown function. (156 aa)    
Predicted Functional Partners:
PP_3316
Putative Chaperone-associated ATPase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the ClpA/ClpB family.
 
    0.719
PP_3317
Homologs of previously reported genes of unknown function.
  
    0.505
PP_3314
Heat shock protein, HSP20 family; Belongs to the small heat shock protein (HSP20) family.
  
    0.490
PP_3318
Homologs of previously reported genes of unknown function.
  
    0.484
PP_3313
Putative Heat shock protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the small heat shock protein (HSP20) family.
  
    0.447
PP_3312
Putative Heat shock protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the small heat shock protein (HSP20) family.
 
    0.432
PP_3212
Rieske 2Fe-2S family protein.
  
     0.426
yhaV
Toxin endoribonuclease of toxin antitoxin system SohB(PrlF)-YhaV; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Transcription.
  
     0.403
Your Current Organism:
Pseudomonas putida KT2440
NCBI taxonomy Id: 160488
Other names: P. putida KT2440, Pseudomonas putida (strain KT2440), Pseudomonas putida str. KT2440
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.