STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
PP_3316Putative Chaperone-associated ATPase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the ClpA/ClpB family. (940 aa)    
Predicted Functional Partners:
PP_3090
OmpA domain protein.
  
  
 0.862
vgrG-III
Type 6 secretion system protein; Function of strongly homologous gene; regulator.
  
  
 0.850
vgrG-II
Type 6 secretion system protein; Function of strongly homologous gene; regulator.
  
  
 0.821
vgrG-I
Type 6 secretion system protein; Function of strongly homologous gene; regulator.
  
  
 0.819
PP_3314
Heat shock protein, HSP20 family; Belongs to the small heat shock protein (HSP20) family.
 
 
 0.807
PP_3312
Putative Heat shock protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the small heat shock protein (HSP20) family.
 
 
 0.788
clpP
ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.
 
 
 0.772
PP_4849
Putative DnaK protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
 
 0.751
hscA
DnaK-like molecular chaperone specific for IscU; Chaperone involved in the maturation of iron-sulfur cluster- containing proteins. Has a low intrinsic ATPase activity which is markedly stimulated by HscB.
  
 
 0.749
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 
 0.748
Your Current Organism:
Pseudomonas putida KT2440
NCBI taxonomy Id: 160488
Other names: P. putida KT2440, Pseudomonas putida (strain KT2440), Pseudomonas putida str. KT2440
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.