STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mhpT3-hydroxyphenylpropionate / 3-hydroxycinnamate:H+ symporter; Function of strongly homologous gene; transporter; Fattyacidandphospholipidmetabolism : Degradation. (413 aa)    
Predicted Functional Partners:
PP_3359
Putative Hydroxycinnamic acid degradation regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
   
 0.880
PP_3350
Homologs of previously reported genes of unknown function.
       0.676
PP_1791
Putative Aldolase/synthase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
     
 0.660
PP_3425
Efflux transporter RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
      
 0.634
cidR
Transcriptional regulator, LysR family; Function of strongly homologous gene; regulator; Belongs to the LysR transcriptional regulatory family.
      
 0.549
PP_2604
Major facilitator family transporter; Function of strongly homologous gene; transporter; Transport and binding proteins.
  
     0.511
PP_3658
Putative Aromatic compound MFS transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
   
0.461
PP_4283
Transcriptional regulator, GntR family.
      
 0.405
Your Current Organism:
Pseudomonas putida KT2440
NCBI taxonomy Id: 160488
Other names: P. putida KT2440, Pseudomonas putida (strain KT2440), Pseudomonas putida str. KT2440
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.