STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mhpT3-hydroxyphenylpropionate / 3-hydroxycinnamate:H+ symporter; Function of strongly homologous gene; transporter; Fattyacidandphospholipidmetabolism : Degradation. (413 aa)    
Predicted Functional Partners:
PP_1791
Putative Aldolase/synthase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
     
 0.674
PP_3350
Homologs of previously reported genes of unknown function.
  
  
 0.673
PP_3425
Efflux transporter RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
   
  
 0.517
PP_2604
Major facilitator family transporter; Function of strongly homologous gene; transporter; Transport and binding proteins.
  
     0.511
PP_3658
Putative Aromatic compound MFS transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
  
0.460
PP_3353
Putative sulfatase-modifying factor (C-alpha-formyglycine- generating enzyme); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Unknownfunction : Enzymes of unknown specificity.
  
  
 0.401
Your Current Organism:
Pseudomonas putida KT2440
NCBI taxonomy Id: 160488
Other names: P. putida KT2440, Pseudomonas putida (strain KT2440), Pseudomonas putida str. KT2440
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.