STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
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[Homology]
Score
atsAArylsulfatase; Function experimentally demonstrated in the studied genus; enzyme; Centralintermediarymetabolism : Sulfur metabolism. (554 aa)    
Predicted Functional Partners:
PP_3353
Putative sulfatase-modifying factor (C-alpha-formyglycine- generating enzyme); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Unknownfunction : Enzymes of unknown specificity.
 
   0.975
atsK
Alpha-ketoglutarate-dependent sulfonate dioxygenase; Catalyzes the alpha-ketoglutarate-dependent hydroxylation of taurine yielding sulfite and aminoacetaldehyde after decomposition of an unstable intermediate.
  
  
 0.968
rnz
Ribonuclease Z; Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA; Belongs to the RNase Z family.
     
 0.888
PP_2045
Metallo-beta-lactamase family protein.
   
 0.803
pvdO
Pyoverdine biosynthesis related protein; Function of strongly homologous gene; enzyme; Fattyacidandphospholipidmetabolism : Biosynthesis.
 
   0.799
PP_1033
Sulfatase domain protein.
 
   
 0.668
PP_2814
Homologs of previously reported genes of unknown function.
  
     0.645
PP_2807
Homologs of previously reported genes of unknown function.
  
     0.597
gloB
Hydroxyacylglutathione hydrolase; Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid.
      
 0.550
cysK
Cysteine synthase A; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Aminoacidbiosynthesis : Serine family; Belongs to the cysteine synthase/cystathionine beta- synthase family.
  
  
 0.489
Your Current Organism:
Pseudomonas putida KT2440
NCBI taxonomy Id: 160488
Other names: P. putida KT2440, Pseudomonas putida (strain KT2440), Pseudomonas putida str. KT2440
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