STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
PP_3359Putative Hydroxycinnamic acid degradation regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (156 aa)    
Predicted Functional Partners:
mhpT
3-hydroxyphenylpropionate / 3-hydroxycinnamate:H+ symporter; Function of strongly homologous gene; transporter; Fattyacidandphospholipidmetabolism : Degradation.
  
   
 0.880
cidR
Transcriptional regulator, LysR family; Function of strongly homologous gene; regulator; Belongs to the LysR transcriptional regulatory family.
   
  
 0.852
PP_4283
Transcriptional regulator, GntR family.
      
 0.768
fcs
feruloyl-CoA-synthetase; Function experimentally demonstrated in the studied species; enzyme; Biologicalprocesses : Scavenge (Catabolism).
 
  
 0.737
PP_2046
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
   
  
 0.659
pobA
P-hydroxybenzoate hydroxylase; Function experimentally demonstrated in the studied species; enzyme; Fattyacidandphospholipidmetabolism : Degradation.
  
    0.634
PP_3360
Homologs of previously reported genes of unknown function.
       0.527
vdh
Vanillin dehydrogenase; Function experimentally demonstrated in the studied species; enzyme; Biologicalprocesses : Scavenge (Catabolism); Belongs to the aldehyde dehydrogenase family.
 
    0.505
PP_3358
hydroxycinnamoyl-CoA hydratase-lyase; Function of strongly homologous gene; enzyme; Biologicalprocesses : Scavenge (Catabolism); Belongs to the enoyl-CoA hydratase/isomerase family.
     
 0.503
bglX
Periplasmic beta-D-glucoside glucohydrolase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Energy metabolism; Belongs to the glycosyl hydrolase 3 family.
  
  
 0.443
Your Current Organism:
Pseudomonas putida KT2440
NCBI taxonomy Id: 160488
Other names: P. putida KT2440, Pseudomonas putida (strain KT2440), Pseudomonas putida str. KT2440
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