STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP_3362Transcriptional regulator, AsnC family. (146 aa)    
Predicted Functional Partners:
PP_1307
AsnC family transcriptional regulator.
  
     0.764
PP_4308
Transcriptional regulator, AsnC family.
  
     0.763
PP_4424
Uncharacterized HTH-type transcriptional regulator y4tD.
  
    0.762
ybaO
Putative LRP-like transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator; Transcription.
  
    0.762
PP_4776
AsnC family transcriptional regulator.
  
     0.760
PP_5188
Putative transcriptional regulator (AsnC/Lrp family); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
  
     0.760
bkdR
Bkd operon transcriptional regulator; Function experimentally demonstrated in the studied species; regulator; Regulatory functions.
  
     0.759
PP_3532
Transcriptional regulator, AsnC family.
  
     0.734
PP_3361
Putative aminotransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Unknownfunction : Enzymes of unknown specificity.
 
  
 0.689
Your Current Organism:
Pseudomonas putida KT2440
NCBI taxonomy Id: 160488
Other names: P. putida KT2440, Pseudomonas putida (strain KT2440), Pseudomonas putida str. KT2440
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.