STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP_3398Putative Curli fiber surface-exposed nucleator CsgB; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (157 aa)    
Predicted Functional Partners:
PP_3399
Minor curlin subunit CsgB, nucleation component of curlin monomers; Function of strongly homologous gene; factor; Cell envelope.
 
   
 0.948
PP_0075
Putative choline sulfate transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
      
 0.930
csgG
Curli secretion and assembly complex lipoprotein; Function of homologous gene experimentally demonstrated in an other organism; lipoprotein; Transport and binding proteins.
 
   
 0.842
csgF
Curli secretion and assembly outer membrane associated component; Function of homologous gene experimentally demonstrated in an other organism; putative membrane component; Transport and binding proteins.
 
   
 0.836
PP_0101
Putative sulfate transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
      
 0.835
PP_0718
Sulfate transporter.
      
 0.835
PP_1407
Sulfate transporter.
      
 0.835
PP_4112
Sulphate transporter.
      
 0.835
PP_3397
Homologs of previously reported genes of unknown function.
 
    0.781
PP_3396
Homologs of previously reported genes of unknown function.
  
    0.736
Your Current Organism:
Pseudomonas putida KT2440
NCBI taxonomy Id: 160488
Other names: P. putida KT2440, Pseudomonas putida (strain KT2440), Pseudomonas putida str. KT2440
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.