STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gntTD-gluconate transporter; Function experimentally demonstrated in the studied strain; transporter; Transportandbindingproteins : Carbohydrates, organic alcohols, and acids. (450 aa)    
Predicted Functional Partners:
gnuK
D-gluconate kinase; Function experimentally demonstrated in the studied strain; enzyme.
 
  
 0.816
gtsB
Mannose/glucose ABC transporter, permease protein; Function experimentally demonstrated in the studied strain; transporter; Transport and binding proteins.
      
 0.748
gtsD
Mannose/glucose ABC transporter - ATP binding subunit; Function experimentally demonstrated in the studied strain; transporter; Fattyacidandphospholipidmetabolism : Biosynthesis; Belongs to the ABC transporter superfamily.
      
 0.743
PP_4283
Transcriptional regulator, GntR family.
  
  
 0.674
moaC
Cyclic pyranopterin monophosphate synthase accessory protein; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family.
      
 0.673
gtsA
Mannose/glucose ABC transporter, glucose-binding periplasmic protein; Function experimentally demonstrated in the studied strain; transporter; Transport and binding proteins.
      
 0.650
PP_3418
Homologs of previously reported genes of unknown function; Unknown function.
       0.552
gnl
Gluconolactonase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Energymetabolism : Sugars.
     
 0.547
garK
Glycerate kinase; Function experimentally demonstrated in the studied strain; enzyme; Energymetabolism : Sugars; Belongs to the glycerate kinase type-1 family.
 
  
 0.542
gntZ
Putative 6-phosphogluconate dehydrogenase, decarboxylating; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
 
  
 0.488
Your Current Organism:
Pseudomonas putida KT2440
NCBI taxonomy Id: 160488
Other names: P. putida KT2440, Pseudomonas putida (strain KT2440), Pseudomonas putida str. KT2440
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