Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
xcpTType II secretion pathway protein XcpT. (169 aa)    
Predicted Functional Partners:
xcpS
Type II secretion pathway protein XcpS.
 
  
 0.995
xcpX
Type II secretion system protein K.
 
 
 0.987
xcpQ
Type II secretion pathway protein XcpQ.
 
  
 0.983
PP_3477
Putative secretion type II protein related to protein G; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; membrane component; Transport and binding proteins.
 
  
  0.949
xcpU
Type II secretion pathway protein XcpU.
  
  
 0.943
PP_3476
Type II secretion system protein G.
 
  
 
0.930
gspG
Putative protein secretion protein for export; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter; Transport and binding proteins.
  
  
0.915
xcpP
Type II secretion pathway protein XcpP.
  
  
 0.892
gspE
Putative protein secretion protein for export; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter; Transport and binding proteins.
 
 
 0.875
gspF
Putative protein secretion protein for export; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter; Transport and binding proteins.
 
  
 0.874
Your Current Organism:
Pseudomonas putida KT2440
NCBI taxonomy Id: 160488
Other names: P. putida KT2440, Pseudomonas putida (strain KT2440), Pseudomonas putida str. KT2440
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.