Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
PP_3444Glyoxalase family protein. (159 aa)    
Predicted Functional Partners:
PP_4556
Homologs of previously reported genes of unknown function.
     0.857
PP_5329
Putative phosphate ABC transporter, periplasmic phosphate-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
      
 0.771
PP_4554
Homologs of previously reported genes of unknown function.
     0.744
PP_3629
Homologs of previously reported genes of unknown function.
 
  
 0.706
PP_3445
Homologs of previously reported genes of unknown function.
  
    0.697
PP_3818
Periplamic phosphate-binding protein.
   
  
 0.678
PP_4555
Homologs of previously reported genes of unknown function.
 
    0.597
PP_4553
RNA polymerase sigma-70 factor, ECF subfamily.
 
     0.593
ppx
Exopolyphosphatase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Centralintermediarymetabolism : Phosphorus compounds; Belongs to the GppA/Ppx family.
      
 0.548
PP_2851
Homologs of previously reported genes of unknown function.
 
    0.527
Your Current Organism:
Pseudomonas putida KT2440
NCBI taxonomy Id: 160488
Other names: P. putida KT2440, Pseudomonas putida (strain KT2440), Pseudomonas putida str. KT2440
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